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Introduce DecodeSignal::annotation_visibility_changed and use it
[pulseview.git] / pv / data / decodesignal.cpp
1 /*
2  * This file is part of the PulseView project.
3  *
4  * Copyright (C) 2017 Soeren Apel <soeren@apelpie.net>
5  *
6  * This program is free software; you can redistribute it and/or modify
7  * it under the terms of the GNU General Public License as published by
8  * the Free Software Foundation; either version 2 of the License, or
9  * (at your option) any later version.
10  *
11  * This program is distributed in the hope that it will be useful,
12  * but WITHOUT ANY WARRANTY; without even the implied warranty of
13  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
14  * GNU General Public License for more details.
15  *
16  * You should have received a copy of the GNU General Public License
17  * along with this program; if not, see <http://www.gnu.org/licenses/>.
18  */
19
20 #include <cstring>
21 #include <forward_list>
22 #include <limits>
23
24 #include <QDebug>
25
26 #include "logic.hpp"
27 #include "logicsegment.hpp"
28 #include "decodesignal.hpp"
29 #include "signaldata.hpp"
30
31 #include <pv/data/decode/decoder.hpp>
32 #include <pv/data/decode/row.hpp>
33 #include <pv/globalsettings.hpp>
34 #include <pv/session.hpp>
35
36 using std::lock_guard;
37 using std::make_shared;
38 using std::min;
39 using std::out_of_range;
40 using std::shared_ptr;
41 using std::unique_lock;
42 using pv::data::decode::AnnotationClass;
43 using pv::data::decode::DecodeChannel;
44
45 namespace pv {
46 namespace data {
47
48 const double DecodeSignal::DecodeMargin = 1.0;
49 const double DecodeSignal::DecodeThreshold = 0.2;
50 const int64_t DecodeSignal::DecodeChunkLength = 256 * 1024;
51
52
53 DecodeSignal::DecodeSignal(pv::Session &session) :
54         SignalBase(nullptr, SignalBase::DecodeChannel),
55         session_(session),
56         srd_session_(nullptr),
57         logic_mux_data_invalid_(false),
58         stack_config_changed_(true),
59         current_segment_id_(0)
60 {
61         connect(&session_, SIGNAL(capture_state_changed(int)),
62                 this, SLOT(on_capture_state_changed(int)));
63 }
64
65 DecodeSignal::~DecodeSignal()
66 {
67         reset_decode(true);
68 }
69
70 const vector< shared_ptr<Decoder> >& DecodeSignal::decoder_stack() const
71 {
72         return stack_;
73 }
74
75 void DecodeSignal::stack_decoder(const srd_decoder *decoder, bool restart_decode)
76 {
77         assert(decoder);
78
79         // Set name if this decoder is the first in the list or the name is unchanged
80         const srd_decoder* prev_dec = stack_.empty() ? nullptr : stack_.back()->get_srd_decoder();
81         const QString prev_dec_name = prev_dec ? QString::fromUtf8(prev_dec->name) : QString();
82
83         if ((stack_.empty()) || ((stack_.size() > 0) && (name() == prev_dec_name)))
84                 set_name(QString::fromUtf8(decoder->name));
85
86         const shared_ptr<Decoder> dec = make_shared<Decoder>(decoder, stack_.size());
87         stack_.push_back(dec);
88
89         connect(dec.get(), SIGNAL(annotation_visibility_changed()),
90                 this, SLOT(on_annotation_visibility_changed()));
91
92         // Include the newly created decode channels in the channel lists
93         update_channel_list();
94
95         stack_config_changed_ = true;
96         auto_assign_signals(dec);
97         commit_decoder_channels();
98
99         decoder_stacked((void*)dec.get());
100
101         if (restart_decode)
102                 begin_decode();
103 }
104
105 void DecodeSignal::remove_decoder(int index)
106 {
107         assert(index >= 0);
108         assert(index < (int)stack_.size());
109
110         // Find the decoder in the stack
111         auto iter = stack_.begin();
112         for (int i = 0; i < index; i++, iter++)
113                 assert(iter != stack_.end());
114
115         decoder_removed(iter->get());
116
117         // Delete the element
118         stack_.erase(iter);
119
120         // Update channels and decoded data
121         stack_config_changed_ = true;
122         update_channel_list();
123         begin_decode();
124 }
125
126 bool DecodeSignal::toggle_decoder_visibility(int index)
127 {
128         auto iter = stack_.cbegin();
129         for (int i = 0; i < index; i++, iter++)
130                 assert(iter != stack_.end());
131
132         shared_ptr<Decoder> dec = *iter;
133
134         // Toggle decoder visibility
135         bool state = false;
136         if (dec) {
137                 state = !dec->visible();
138                 dec->set_visible(state);
139         }
140
141         return state;
142 }
143
144 void DecodeSignal::reset_decode(bool shutting_down)
145 {
146         resume_decode();  // Make sure the decode thread isn't blocked by pausing
147
148         if (stack_config_changed_ || shutting_down)
149                 stop_srd_session();
150         else
151                 terminate_srd_session();
152
153         if (decode_thread_.joinable()) {
154                 decode_interrupt_ = true;
155                 decode_input_cond_.notify_one();
156                 decode_thread_.join();
157         }
158
159         if (logic_mux_thread_.joinable()) {
160                 logic_mux_interrupt_ = true;
161                 logic_mux_cond_.notify_one();
162                 logic_mux_thread_.join();
163         }
164
165         current_segment_id_ = 0;
166         segments_.clear();
167
168         logic_mux_data_.reset();
169         logic_mux_data_invalid_ = true;
170
171         if (!error_message_.isEmpty()) {
172                 error_message_ = QString();
173                 // TODO Emulate noquote()
174                 qDebug().nospace() << name() << ": Error cleared";
175         }
176
177         decode_reset();
178 }
179
180 void DecodeSignal::begin_decode()
181 {
182         if (decode_thread_.joinable()) {
183                 decode_interrupt_ = true;
184                 decode_input_cond_.notify_one();
185                 decode_thread_.join();
186         }
187
188         if (logic_mux_thread_.joinable()) {
189                 logic_mux_interrupt_ = true;
190                 logic_mux_cond_.notify_one();
191                 logic_mux_thread_.join();
192         }
193
194         reset_decode();
195
196         if (stack_.size() == 0) {
197                 set_error_message(tr("No decoders"));
198                 return;
199         }
200
201         assert(channels_.size() > 0);
202
203         if (get_assigned_signal_count() == 0) {
204                 set_error_message(tr("There are no channels assigned to this decoder"));
205                 return;
206         }
207
208         // Make sure that all assigned channels still provide logic data
209         // (can happen when a converted signal was assigned but the
210         // conversion removed in the meanwhile)
211         for (decode::DecodeChannel& ch : channels_)
212                 if (ch.assigned_signal && !(ch.assigned_signal->logic_data() != nullptr))
213                         ch.assigned_signal = nullptr;
214
215         // Check that all decoders have the required channels
216         for (const shared_ptr<Decoder>& dec : stack_)
217                 if (!dec->have_required_channels()) {
218                         set_error_message(tr("One or more required channels "
219                                 "have not been specified"));
220                         return;
221                 }
222
223         // Free the logic data and its segment(s) if it needs to be updated
224         if (logic_mux_data_invalid_)
225                 logic_mux_data_.reset();
226
227         if (!logic_mux_data_) {
228                 const uint32_t ch_count = get_assigned_signal_count();
229                 logic_mux_unit_size_ = (ch_count + 7) / 8;
230                 logic_mux_data_ = make_shared<Logic>(ch_count);
231         }
232
233         // Receive notifications when new sample data is available
234         connect_input_notifiers();
235
236         if (get_input_segment_count() == 0) {
237                 set_error_message(tr("No input data"));
238                 return;
239         }
240
241         // Make sure the logic output data is complete and up-to-date
242         logic_mux_interrupt_ = false;
243         logic_mux_thread_ = std::thread(&DecodeSignal::logic_mux_proc, this);
244
245         // Decode the muxed logic data
246         decode_interrupt_ = false;
247         decode_thread_ = std::thread(&DecodeSignal::decode_proc, this);
248 }
249
250 void DecodeSignal::pause_decode()
251 {
252         decode_paused_ = true;
253 }
254
255 void DecodeSignal::resume_decode()
256 {
257         // Manual unlocking is done before notifying, to avoid waking up the
258         // waiting thread only to block again (see notify_one for details)
259         decode_pause_mutex_.unlock();
260         decode_pause_cond_.notify_one();
261         decode_paused_ = false;
262 }
263
264 bool DecodeSignal::is_paused() const
265 {
266         return decode_paused_;
267 }
268
269 QString DecodeSignal::error_message() const
270 {
271         lock_guard<mutex> lock(output_mutex_);
272         return error_message_;
273 }
274
275 const vector<decode::DecodeChannel> DecodeSignal::get_channels() const
276 {
277         return channels_;
278 }
279
280 void DecodeSignal::auto_assign_signals(const shared_ptr<Decoder> dec)
281 {
282         bool new_assignment = false;
283
284         // Try to auto-select channels that don't have signals assigned yet
285         for (decode::DecodeChannel& ch : channels_) {
286                 // If a decoder is given, auto-assign only its channels
287                 if (dec && (ch.decoder_ != dec))
288                         continue;
289
290                 if (ch.assigned_signal)
291                         continue;
292
293                 QString ch_name = ch.name.toLower();
294                 ch_name = ch_name.replace(QRegExp("[-_.]"), " ");
295
296                 shared_ptr<data::SignalBase> match;
297                 for (const shared_ptr<data::SignalBase>& s : session_.signalbases()) {
298                         if (!s->enabled())
299                                 continue;
300
301                         QString s_name = s->name().toLower();
302                         s_name = s_name.replace(QRegExp("[-_.]"), " ");
303
304                         if (s->logic_data() &&
305                                 ((ch_name.contains(s_name)) || (s_name.contains(ch_name)))) {
306                                 if (!match)
307                                         match = s;
308                                 else {
309                                         // Only replace an existing match if it matches more characters
310                                         int old_unmatched = ch_name.length() - match->name().length();
311                                         int new_unmatched = ch_name.length() - s->name().length();
312                                         if (abs(new_unmatched) < abs(old_unmatched))
313                                                 match = s;
314                                 }
315                         }
316                 }
317
318                 if (match) {
319                         ch.assigned_signal = match.get();
320                         new_assignment = true;
321                 }
322         }
323
324         if (new_assignment) {
325                 logic_mux_data_invalid_ = true;
326                 stack_config_changed_ = true;
327                 commit_decoder_channels();
328                 channels_updated();
329         }
330 }
331
332 void DecodeSignal::assign_signal(const uint16_t channel_id, const SignalBase *signal)
333 {
334         for (decode::DecodeChannel& ch : channels_)
335                 if (ch.id == channel_id) {
336                         ch.assigned_signal = signal;
337                         logic_mux_data_invalid_ = true;
338                 }
339
340         stack_config_changed_ = true;
341         commit_decoder_channels();
342         channels_updated();
343         begin_decode();
344 }
345
346 int DecodeSignal::get_assigned_signal_count() const
347 {
348         // Count all channels that have a signal assigned to them
349         return count_if(channels_.begin(), channels_.end(),
350                 [](decode::DecodeChannel ch) { return ch.assigned_signal; });
351 }
352
353 void DecodeSignal::set_initial_pin_state(const uint16_t channel_id, const int init_state)
354 {
355         for (decode::DecodeChannel& ch : channels_)
356                 if (ch.id == channel_id)
357                         ch.initial_pin_state = init_state;
358
359         stack_config_changed_ = true;
360         channels_updated();
361         begin_decode();
362 }
363
364 double DecodeSignal::get_samplerate() const
365 {
366         double result = 0;
367
368         // TODO For now, we simply return the first samplerate that we have
369         if (segments_.size() > 0)
370                 result = segments_.front().samplerate;
371
372         return result;
373 }
374
375 const pv::util::Timestamp DecodeSignal::start_time() const
376 {
377         pv::util::Timestamp result;
378
379         // TODO For now, we simply return the first start time that we have
380         if (segments_.size() > 0)
381                 result = segments_.front().start_time;
382
383         return result;
384 }
385
386 int64_t DecodeSignal::get_working_sample_count(uint32_t segment_id) const
387 {
388         // The working sample count is the highest sample number for
389         // which all used signals have data available, so go through all
390         // channels and use the lowest overall sample count of the segment
391
392         int64_t count = std::numeric_limits<int64_t>::max();
393         bool no_signals_assigned = true;
394
395         for (const decode::DecodeChannel& ch : channels_)
396                 if (ch.assigned_signal) {
397                         no_signals_assigned = false;
398
399                         const shared_ptr<Logic> logic_data = ch.assigned_signal->logic_data();
400                         if (!logic_data || logic_data->logic_segments().empty())
401                                 return 0;
402
403                         try {
404                                 const shared_ptr<LogicSegment> segment = logic_data->logic_segments().at(segment_id);
405                                 count = min(count, (int64_t)segment->get_sample_count());
406                         } catch (out_of_range&) {
407                                 return 0;
408                         }
409                 }
410
411         return (no_signals_assigned ? 0 : count);
412 }
413
414 int64_t DecodeSignal::get_decoded_sample_count(uint32_t segment_id,
415         bool include_processing) const
416 {
417         lock_guard<mutex> decode_lock(output_mutex_);
418
419         int64_t result = 0;
420
421         if (segment_id >= segments_.size())
422                 return result;
423
424         if (include_processing)
425                 result = segments_[segment_id].samples_decoded_incl;
426         else
427                 result = segments_[segment_id].samples_decoded_excl;
428
429         return result;
430 }
431
432 vector<Row*> DecodeSignal::get_rows(bool visible_only)
433 {
434         vector<Row*> rows;
435
436         for (const shared_ptr<Decoder>& dec : stack_) {
437                 assert(dec);
438                 if (visible_only && !dec->visible())
439                         continue;
440
441                 for (Row* row : dec->get_rows())
442                         rows.push_back(row);
443         }
444
445         return rows;
446 }
447
448 vector<const Row*> DecodeSignal::get_rows(bool visible_only) const
449 {
450         vector<const Row*> rows;
451
452         for (const shared_ptr<Decoder>& dec : stack_) {
453                 assert(dec);
454                 if (visible_only && !dec->visible())
455                         continue;
456
457                 for (const Row* row : dec->get_rows())
458                         rows.push_back(row);
459         }
460
461         return rows;
462 }
463
464
465 uint64_t DecodeSignal::get_annotation_count(const Row* row, uint32_t segment_id) const
466 {
467         if (segment_id >= segments_.size())
468                 return 0;
469
470         const DecodeSegment* segment = &(segments_.at(segment_id));
471
472         auto row_it = segment->annotation_rows.find(row);
473
474         const RowData* rd;
475         if (row_it == segment->annotation_rows.end())
476                 return 0;
477         else
478                 rd = &(row_it->second);
479
480         return rd->get_annotation_count();
481 }
482
483 void DecodeSignal::get_annotation_subset(deque<const Annotation*> &dest,
484         const Row* row, uint32_t segment_id, uint64_t start_sample,
485         uint64_t end_sample) const
486 {
487         lock_guard<mutex> lock(output_mutex_);
488
489         if (segment_id >= segments_.size())
490                 return;
491
492         const DecodeSegment* segment = &(segments_.at(segment_id));
493
494         auto row_it = segment->annotation_rows.find(row);
495
496         const RowData* rd;
497         if (row_it == segment->annotation_rows.end())
498                 return;
499         else
500                 rd = &(row_it->second);
501
502         rd->get_annotation_subset(dest, start_sample, end_sample);
503 }
504
505 void DecodeSignal::get_annotation_subset(deque<const Annotation*> &dest,
506         uint32_t segment_id, uint64_t start_sample, uint64_t end_sample) const
507 {
508         for (const Row* row : get_rows())
509                 get_annotation_subset(dest, row, segment_id, start_sample, end_sample);
510 }
511
512 uint32_t DecodeSignal::get_binary_data_chunk_count(uint32_t segment_id,
513         const Decoder* dec, uint32_t bin_class_id) const
514 {
515         if (segments_.size() == 0)
516                 return 0;
517
518         try {
519                 const DecodeSegment *segment = &(segments_.at(segment_id));
520
521                 for (const DecodeBinaryClass& bc : segment->binary_classes)
522                         if ((bc.decoder == dec) && (bc.info->bin_class_id == bin_class_id))
523                                 return bc.chunks.size();
524         } catch (out_of_range&) {
525                 // Do nothing
526         }
527
528         return 0;
529 }
530
531 void DecodeSignal::get_binary_data_chunk(uint32_t segment_id,
532         const  Decoder* dec, uint32_t bin_class_id, uint32_t chunk_id,
533         const vector<uint8_t> **dest, uint64_t *size)
534 {
535         try {
536                 const DecodeSegment *segment = &(segments_.at(segment_id));
537
538                 for (const DecodeBinaryClass& bc : segment->binary_classes)
539                         if ((bc.decoder == dec) && (bc.info->bin_class_id == bin_class_id)) {
540                                 if (dest) *dest = &(bc.chunks.at(chunk_id).data);
541                                 if (size) *size = bc.chunks.at(chunk_id).data.size();
542                                 return;
543                         }
544         } catch (out_of_range&) {
545                 // Do nothing
546         }
547 }
548
549 void DecodeSignal::get_merged_binary_data_chunks_by_sample(uint32_t segment_id,
550         const Decoder* dec, uint32_t bin_class_id, uint64_t start_sample,
551         uint64_t end_sample, vector<uint8_t> *dest) const
552 {
553         assert(dest != nullptr);
554
555         try {
556                 const DecodeSegment *segment = &(segments_.at(segment_id));
557
558                 const DecodeBinaryClass* bin_class = nullptr;
559                 for (const DecodeBinaryClass& bc : segment->binary_classes)
560                         if ((bc.decoder == dec) && (bc.info->bin_class_id == bin_class_id))
561                                 bin_class = &bc;
562
563                 // Determine overall size before copying to resize dest vector only once
564                 uint64_t size = 0;
565                 uint64_t matches = 0;
566                 for (const DecodeBinaryDataChunk& chunk : bin_class->chunks)
567                         if ((chunk.sample >= start_sample) && (chunk.sample < end_sample)) {
568                                 size += chunk.data.size();
569                                 matches++;
570                         }
571                 dest->resize(size);
572
573                 uint64_t offset = 0;
574                 uint64_t matches2 = 0;
575                 for (const DecodeBinaryDataChunk& chunk : bin_class->chunks)
576                         if ((chunk.sample >= start_sample) && (chunk.sample < end_sample)) {
577                                 memcpy(dest->data() + offset, chunk.data.data(), chunk.data.size());
578                                 offset += chunk.data.size();
579                                 matches2++;
580
581                                 // Make sure we don't overwrite memory if the array grew in the meanwhile
582                                 if (matches2 == matches)
583                                         break;
584                         }
585         } catch (out_of_range&) {
586                 // Do nothing
587         }
588 }
589
590 void DecodeSignal::get_merged_binary_data_chunks_by_offset(uint32_t segment_id,
591         const Decoder* dec, uint32_t bin_class_id, uint64_t start, uint64_t end,
592         vector<uint8_t> *dest) const
593 {
594         assert(dest != nullptr);
595
596         try {
597                 const DecodeSegment *segment = &(segments_.at(segment_id));
598
599                 const DecodeBinaryClass* bin_class = nullptr;
600                 for (const DecodeBinaryClass& bc : segment->binary_classes)
601                         if ((bc.decoder == dec) && (bc.info->bin_class_id == bin_class_id))
602                                 bin_class = &bc;
603
604                 // Determine overall size before copying to resize dest vector only once
605                 uint64_t size = 0;
606                 uint64_t offset = 0;
607                 for (const DecodeBinaryDataChunk& chunk : bin_class->chunks) {
608                         if (offset >= start)
609                                 size += chunk.data.size();
610                         offset += chunk.data.size();
611                         if (offset >= end)
612                                 break;
613                 }
614                 dest->resize(size);
615
616                 offset = 0;
617                 uint64_t dest_offset = 0;
618                 for (const DecodeBinaryDataChunk& chunk : bin_class->chunks) {
619                         if (offset >= start) {
620                                 memcpy(dest->data() + dest_offset, chunk.data.data(), chunk.data.size());
621                                 dest_offset += chunk.data.size();
622                         }
623                         offset += chunk.data.size();
624                         if (offset >= end)
625                                 break;
626                 }
627         } catch (out_of_range&) {
628                 // Do nothing
629         }
630 }
631
632 const DecodeBinaryClass* DecodeSignal::get_binary_data_class(uint32_t segment_id,
633         const Decoder* dec, uint32_t bin_class_id) const
634 {
635         try {
636                 const DecodeSegment *segment = &(segments_.at(segment_id));
637
638                 for (const DecodeBinaryClass& bc : segment->binary_classes)
639                         if ((bc.decoder == dec) && (bc.info->bin_class_id == bin_class_id))
640                                 return &bc;
641         } catch (out_of_range&) {
642                 // Do nothing
643         }
644
645         return nullptr;
646 }
647
648 const deque<const Annotation*>* DecodeSignal::get_all_annotations_by_segment(
649         uint32_t segment_id) const
650 {
651         try {
652                 const DecodeSegment *segment = &(segments_.at(segment_id));
653                 return &(segment->all_annotations);
654         } catch (out_of_range&) {
655                 // Do nothing
656         }
657
658         return nullptr;
659 }
660
661 void DecodeSignal::save_settings(QSettings &settings) const
662 {
663         SignalBase::save_settings(settings);
664
665         settings.setValue("decoders", (int)(stack_.size()));
666
667         // Save decoder stack
668         int decoder_idx = 0;
669         for (const shared_ptr<Decoder>& decoder : stack_) {
670                 settings.beginGroup("decoder" + QString::number(decoder_idx++));
671
672                 settings.setValue("id", decoder->get_srd_decoder()->id);
673                 settings.setValue("visible", decoder->visible());
674
675                 // Save decoder options
676                 const map<string, GVariant*>& options = decoder->options();
677
678                 settings.setValue("options", (int)options.size());
679
680                 // Note: Decoder::options() returns only the options
681                 // that differ from the default. See binding::Decoder::getter()
682                 int i = 0;
683                 for (auto& option : options) {
684                         settings.beginGroup("option" + QString::number(i));
685                         settings.setValue("name", QString::fromStdString(option.first));
686                         GlobalSettings::store_gvariant(settings, option.second);
687                         settings.endGroup();
688                         i++;
689                 }
690
691                 // Save row properties
692                 i = 0;
693                 for (const Row* row : decoder->get_rows()) {
694                         settings.beginGroup("row" + QString::number(i));
695                         settings.setValue("visible", row->visible());
696                         settings.endGroup();
697                         i++;
698                 }
699
700                 // Save class properties
701                 i = 0;
702                 for (const AnnotationClass* ann_class : decoder->ann_classes()) {
703                         settings.beginGroup("ann_class" + QString::number(i));
704                         settings.setValue("visible", ann_class->visible());
705                         settings.endGroup();
706                         i++;
707                 }
708
709                 settings.endGroup();
710         }
711
712         // Save channel mapping
713         settings.setValue("channels", (int)channels_.size());
714
715         for (unsigned int channel_id = 0; channel_id < channels_.size(); channel_id++) {
716                 auto channel = find_if(channels_.begin(), channels_.end(),
717                         [&](decode::DecodeChannel ch) { return ch.id == channel_id; });
718
719                 if (channel == channels_.end()) {
720                         qDebug() << "ERROR: Gap in channel index:" << channel_id;
721                         continue;
722                 }
723
724                 settings.beginGroup("channel" + QString::number(channel_id));
725
726                 settings.setValue("name", channel->name);  // Useful for debugging
727                 settings.setValue("initial_pin_state", channel->initial_pin_state);
728
729                 if (channel->assigned_signal)
730                         settings.setValue("assigned_signal_name", channel->assigned_signal->name());
731
732                 settings.endGroup();
733         }
734 }
735
736 void DecodeSignal::restore_settings(QSettings &settings)
737 {
738         SignalBase::restore_settings(settings);
739
740         // Restore decoder stack
741         GSList *dec_list = g_slist_copy((GSList*)srd_decoder_list());
742
743         int decoders = settings.value("decoders").toInt();
744
745         for (int decoder_idx = 0; decoder_idx < decoders; decoder_idx++) {
746                 settings.beginGroup("decoder" + QString::number(decoder_idx));
747
748                 QString id = settings.value("id").toString();
749
750                 for (GSList *entry = dec_list; entry; entry = entry->next) {
751                         const srd_decoder *dec = (srd_decoder*)entry->data;
752                         if (!dec)
753                                 continue;
754
755                         if (QString::fromUtf8(dec->id) == id) {
756                                 shared_ptr<Decoder> decoder = make_shared<Decoder>(dec, stack_.size());
757
758                                 connect(decoder.get(), SIGNAL(annotation_visibility_changed()),
759                                         this, SLOT(on_annotation_visibility_changed()));
760
761                                 stack_.push_back(decoder);
762                                 decoder->set_visible(settings.value("visible", true).toBool());
763
764                                 // Restore decoder options that differ from their default
765                                 int options = settings.value("options").toInt();
766
767                                 for (int i = 0; i < options; i++) {
768                                         settings.beginGroup("option" + QString::number(i));
769                                         QString name = settings.value("name").toString();
770                                         GVariant *value = GlobalSettings::restore_gvariant(settings);
771                                         decoder->set_option(name.toUtf8(), value);
772                                         settings.endGroup();
773                                 }
774
775                                 // Include the newly created decode channels in the channel lists
776                                 update_channel_list();
777
778                                 // Restore row properties
779                                 int i = 0;
780                                 for (Row* row : decoder->get_rows()) {
781                                         settings.beginGroup("row" + QString::number(i));
782                                         row->set_visible(settings.value("visible", true).toBool());
783                                         settings.endGroup();
784                                         i++;
785                                 }
786
787                                 // Restore class properties
788                                 i = 0;
789                                 for (AnnotationClass* ann_class : decoder->ann_classes()) {
790                                         settings.beginGroup("ann_class" + QString::number(i));
791                                         ann_class->set_visible(settings.value("visible", true).toBool());
792                                         settings.endGroup();
793                                         i++;
794                                 }
795
796                                 break;
797                         }
798                 }
799
800                 settings.endGroup();
801                 channels_updated();
802         }
803
804         // Restore channel mapping
805         unsigned int channels = settings.value("channels").toInt();
806
807         const vector< shared_ptr<data::SignalBase> > signalbases =
808                 session_.signalbases();
809
810         for (unsigned int channel_id = 0; channel_id < channels; channel_id++) {
811                 auto channel = find_if(channels_.begin(), channels_.end(),
812                         [&](decode::DecodeChannel ch) { return ch.id == channel_id; });
813
814                 if (channel == channels_.end()) {
815                         qDebug() << "ERROR: Non-existant channel index:" << channel_id;
816                         continue;
817                 }
818
819                 settings.beginGroup("channel" + QString::number(channel_id));
820
821                 QString assigned_signal_name = settings.value("assigned_signal_name").toString();
822
823                 for (const shared_ptr<data::SignalBase>& signal : signalbases)
824                         if (signal->name() == assigned_signal_name)
825                                 channel->assigned_signal = signal.get();
826
827                 channel->initial_pin_state = settings.value("initial_pin_state").toInt();
828
829                 settings.endGroup();
830         }
831
832         // Update the internal structures
833         stack_config_changed_ = true;
834         update_channel_list();
835         commit_decoder_channels();
836
837         begin_decode();
838 }
839
840 void DecodeSignal::set_error_message(QString msg)
841 {
842         error_message_ = msg;
843         // TODO Emulate noquote()
844         qDebug().nospace() << name() << ": " << msg;
845 }
846
847 uint32_t DecodeSignal::get_input_segment_count() const
848 {
849         uint64_t count = std::numeric_limits<uint64_t>::max();
850         bool no_signals_assigned = true;
851
852         for (const decode::DecodeChannel& ch : channels_)
853                 if (ch.assigned_signal) {
854                         no_signals_assigned = false;
855
856                         const shared_ptr<Logic> logic_data = ch.assigned_signal->logic_data();
857                         if (!logic_data || logic_data->logic_segments().empty())
858                                 return 0;
859
860                         // Find the min value of all segment counts
861                         if ((uint64_t)(logic_data->logic_segments().size()) < count)
862                                 count = logic_data->logic_segments().size();
863                 }
864
865         return (no_signals_assigned ? 0 : count);
866 }
867
868 uint32_t DecodeSignal::get_input_samplerate(uint32_t segment_id) const
869 {
870         double samplerate = 0;
871
872         for (const decode::DecodeChannel& ch : channels_)
873                 if (ch.assigned_signal) {
874                         const shared_ptr<Logic> logic_data = ch.assigned_signal->logic_data();
875                         if (!logic_data || logic_data->logic_segments().empty())
876                                 continue;
877
878                         try {
879                                 const shared_ptr<LogicSegment> segment = logic_data->logic_segments().at(segment_id);
880                                 samplerate = segment->samplerate();
881                         } catch (out_of_range&) {
882                                 // Do nothing
883                         }
884                         break;
885                 }
886
887         return samplerate;
888 }
889
890 Decoder* DecodeSignal::get_decoder_by_instance(const srd_decoder *const srd_dec)
891 {
892         for (shared_ptr<Decoder>& d : stack_)
893                 if (d->get_srd_decoder() == srd_dec)
894                         return d.get();
895
896         return nullptr;
897 }
898
899 void DecodeSignal::update_channel_list()
900 {
901         vector<decode::DecodeChannel> prev_channels = channels_;
902         channels_.clear();
903
904         uint16_t id = 0;
905
906         // Copy existing entries, create new as needed
907         for (shared_ptr<Decoder>& decoder : stack_) {
908                 const srd_decoder* srd_dec = decoder->get_srd_decoder();
909                 const GSList *l;
910
911                 // Mandatory channels
912                 for (l = srd_dec->channels; l; l = l->next) {
913                         const struct srd_channel *const pdch = (struct srd_channel *)l->data;
914                         bool ch_added = false;
915
916                         // Copy but update ID if this channel was in the list before
917                         for (decode::DecodeChannel& ch : prev_channels)
918                                 if (ch.pdch_ == pdch) {
919                                         ch.id = id++;
920                                         channels_.push_back(ch);
921                                         ch_added = true;
922                                         break;
923                                 }
924
925                         if (!ch_added) {
926                                 // Create new entry without a mapped signal
927                                 decode::DecodeChannel ch = {id++, 0, false, nullptr,
928                                         QString::fromUtf8(pdch->name), QString::fromUtf8(pdch->desc),
929                                         SRD_INITIAL_PIN_SAME_AS_SAMPLE0, decoder, pdch};
930                                 channels_.push_back(ch);
931                         }
932                 }
933
934                 // Optional channels
935                 for (l = srd_dec->opt_channels; l; l = l->next) {
936                         const struct srd_channel *const pdch = (struct srd_channel *)l->data;
937                         bool ch_added = false;
938
939                         // Copy but update ID if this channel was in the list before
940                         for (decode::DecodeChannel& ch : prev_channels)
941                                 if (ch.pdch_ == pdch) {
942                                         ch.id = id++;
943                                         channels_.push_back(ch);
944                                         ch_added = true;
945                                         break;
946                                 }
947
948                         if (!ch_added) {
949                                 // Create new entry without a mapped signal
950                                 decode::DecodeChannel ch = {id++, 0, true, nullptr,
951                                         QString::fromUtf8(pdch->name), QString::fromUtf8(pdch->desc),
952                                         SRD_INITIAL_PIN_SAME_AS_SAMPLE0, decoder, pdch};
953                                 channels_.push_back(ch);
954                         }
955                 }
956         }
957
958         // Invalidate the logic output data if the channel assignment changed
959         if (prev_channels.size() != channels_.size()) {
960                 // The number of channels changed, there's definitely a difference
961                 logic_mux_data_invalid_ = true;
962         } else {
963                 // Same number but assignment may still differ, so compare all channels
964                 for (size_t i = 0; i < channels_.size(); i++) {
965                         const decode::DecodeChannel& p_ch = prev_channels[i];
966                         const decode::DecodeChannel& ch = channels_[i];
967
968                         if ((p_ch.pdch_ != ch.pdch_) ||
969                                 (p_ch.assigned_signal != ch.assigned_signal)) {
970                                 logic_mux_data_invalid_ = true;
971                                 break;
972                         }
973                 }
974
975         }
976
977         channels_updated();
978 }
979
980 void DecodeSignal::commit_decoder_channels()
981 {
982         // Submit channel list to every decoder, containing only the relevant channels
983         for (shared_ptr<Decoder> dec : stack_) {
984                 vector<decode::DecodeChannel*> channel_list;
985
986                 for (decode::DecodeChannel& ch : channels_)
987                         if (ch.decoder_ == dec)
988                                 channel_list.push_back(&ch);
989
990                 dec->set_channels(channel_list);
991         }
992
993         // Channel bit IDs must be in sync with the channel's apperance in channels_
994         int id = 0;
995         for (decode::DecodeChannel& ch : channels_)
996                 if (ch.assigned_signal)
997                         ch.bit_id = id++;
998 }
999
1000 void DecodeSignal::mux_logic_samples(uint32_t segment_id, const int64_t start, const int64_t end)
1001 {
1002         // Enforce end to be greater than start
1003         if (end <= start)
1004                 return;
1005
1006         // Fetch the channel segments and their data
1007         vector<shared_ptr<LogicSegment> > segments;
1008         vector<const uint8_t*> signal_data;
1009         vector<uint8_t> signal_in_bytepos;
1010         vector<uint8_t> signal_in_bitpos;
1011
1012         for (decode::DecodeChannel& ch : channels_)
1013                 if (ch.assigned_signal) {
1014                         const shared_ptr<Logic> logic_data = ch.assigned_signal->logic_data();
1015
1016                         shared_ptr<LogicSegment> segment;
1017                         try {
1018                                 segment = logic_data->logic_segments().at(segment_id);
1019                         } catch (out_of_range&) {
1020                                 qDebug() << "Muxer error for" << name() << ":" << ch.assigned_signal->name() \
1021                                         << "has no logic segment" << segment_id;
1022                                 return;
1023                         }
1024                         segments.push_back(segment);
1025
1026                         uint8_t* data = new uint8_t[(end - start) * segment->unit_size()];
1027                         segment->get_samples(start, end, data);
1028                         signal_data.push_back(data);
1029
1030                         const int bitpos = ch.assigned_signal->logic_bit_index();
1031                         signal_in_bytepos.push_back(bitpos / 8);
1032                         signal_in_bitpos.push_back(bitpos % 8);
1033                 }
1034
1035
1036         shared_ptr<LogicSegment> output_segment;
1037         try {
1038                 output_segment = logic_mux_data_->logic_segments().at(segment_id);
1039         } catch (out_of_range&) {
1040                 qDebug() << "Muxer error for" << name() << ": no logic mux segment" \
1041                         << segment_id << "in mux_logic_samples(), mux segments size is" \
1042                         << logic_mux_data_->logic_segments().size();
1043                 return;
1044         }
1045
1046         // Perform the muxing of signal data into the output data
1047         uint8_t* output = new uint8_t[(end - start) * output_segment->unit_size()];
1048         unsigned int signal_count = signal_data.size();
1049
1050         for (int64_t sample_cnt = 0; !logic_mux_interrupt_ && (sample_cnt < (end - start));
1051                 sample_cnt++) {
1052
1053                 int bitpos = 0;
1054                 uint8_t bytepos = 0;
1055
1056                 const int out_sample_pos = sample_cnt * output_segment->unit_size();
1057                 for (unsigned int i = 0; i < output_segment->unit_size(); i++)
1058                         output[out_sample_pos + i] = 0;
1059
1060                 for (unsigned int i = 0; i < signal_count; i++) {
1061                         const int in_sample_pos = sample_cnt * segments[i]->unit_size();
1062                         const uint8_t in_sample = 1 &
1063                                 ((signal_data[i][in_sample_pos + signal_in_bytepos[i]]) >> (signal_in_bitpos[i]));
1064
1065                         const uint8_t out_sample = output[out_sample_pos + bytepos];
1066
1067                         output[out_sample_pos + bytepos] = out_sample | (in_sample << bitpos);
1068
1069                         bitpos++;
1070                         if (bitpos > 7) {
1071                                 bitpos = 0;
1072                                 bytepos++;
1073                         }
1074                 }
1075         }
1076
1077         output_segment->append_payload(output, (end - start) * output_segment->unit_size());
1078         delete[] output;
1079
1080         for (const uint8_t* data : signal_data)
1081                 delete[] data;
1082 }
1083
1084 void DecodeSignal::logic_mux_proc()
1085 {
1086         uint32_t segment_id = 0;
1087
1088         assert(logic_mux_data_);
1089
1090         // Create initial logic mux segment
1091         shared_ptr<LogicSegment> output_segment =
1092                 make_shared<LogicSegment>(*logic_mux_data_, segment_id,
1093                         logic_mux_unit_size_, 0);
1094         logic_mux_data_->push_segment(output_segment);
1095
1096         output_segment->set_samplerate(get_input_samplerate(0));
1097
1098         do {
1099                 const uint64_t input_sample_count = get_working_sample_count(segment_id);
1100                 const uint64_t output_sample_count = output_segment->get_sample_count();
1101
1102                 const uint64_t samples_to_process =
1103                         (input_sample_count > output_sample_count) ?
1104                         (input_sample_count - output_sample_count) : 0;
1105
1106                 // Process the samples if necessary...
1107                 if (samples_to_process > 0) {
1108                         const uint64_t unit_size = output_segment->unit_size();
1109                         const uint64_t chunk_sample_count = DecodeChunkLength / unit_size;
1110
1111                         uint64_t processed_samples = 0;
1112                         do {
1113                                 const uint64_t start_sample = output_sample_count + processed_samples;
1114                                 const uint64_t sample_count =
1115                                         min(samples_to_process - processed_samples,     chunk_sample_count);
1116
1117                                 mux_logic_samples(segment_id, start_sample, start_sample + sample_count);
1118                                 processed_samples += sample_count;
1119
1120                                 // ...and process the newly muxed logic data
1121                                 decode_input_cond_.notify_one();
1122                         } while (!logic_mux_interrupt_ && (processed_samples < samples_to_process));
1123                 }
1124
1125                 if (samples_to_process == 0) {
1126                         // TODO Optimize this by caching the input segment count and only
1127                         // querying it when the cached value was reached
1128                         if (segment_id < get_input_segment_count() - 1) {
1129                                 // Process next segment
1130                                 segment_id++;
1131
1132                                 output_segment =
1133                                         make_shared<LogicSegment>(*logic_mux_data_, segment_id,
1134                                                 logic_mux_unit_size_, 0);
1135                                 logic_mux_data_->push_segment(output_segment);
1136
1137                                 output_segment->set_samplerate(get_input_samplerate(segment_id));
1138
1139                         } else {
1140                                 // All segments have been processed
1141                                 logic_mux_data_invalid_ = false;
1142
1143                                 // Wait for more input
1144                                 unique_lock<mutex> logic_mux_lock(logic_mux_mutex_);
1145                                 logic_mux_cond_.wait(logic_mux_lock);
1146                         }
1147                 }
1148
1149         } while (!logic_mux_interrupt_);
1150 }
1151
1152 void DecodeSignal::decode_data(
1153         const int64_t abs_start_samplenum, const int64_t sample_count,
1154         const shared_ptr<LogicSegment> input_segment)
1155 {
1156         const int64_t unit_size = input_segment->unit_size();
1157         const int64_t chunk_sample_count = DecodeChunkLength / unit_size;
1158
1159         for (int64_t i = abs_start_samplenum;
1160                 error_message_.isEmpty() && !decode_interrupt_ &&
1161                         (i < (abs_start_samplenum + sample_count));
1162                 i += chunk_sample_count) {
1163
1164                 const int64_t chunk_end = min(i + chunk_sample_count,
1165                         abs_start_samplenum + sample_count);
1166
1167                 {
1168                         lock_guard<mutex> lock(output_mutex_);
1169                         // Update the sample count showing the samples including currently processed ones
1170                         segments_.at(current_segment_id_).samples_decoded_incl = chunk_end;
1171                 }
1172
1173                 int64_t data_size = (chunk_end - i) * unit_size;
1174                 uint8_t* chunk = new uint8_t[data_size];
1175                 input_segment->get_samples(i, chunk_end, chunk);
1176
1177                 if (srd_session_send(srd_session_, i, chunk_end, chunk,
1178                                 data_size, unit_size) != SRD_OK)
1179                         set_error_message(tr("Decoder reported an error"));
1180
1181                 delete[] chunk;
1182
1183                 {
1184                         lock_guard<mutex> lock(output_mutex_);
1185                         // Now that all samples are processed, the exclusive sample count catches up
1186                         segments_.at(current_segment_id_).samples_decoded_excl = chunk_end;
1187                 }
1188
1189                 // Notify the frontend that we processed some data and
1190                 // possibly have new annotations as well
1191                 new_annotations();
1192
1193                 if (decode_paused_) {
1194                         unique_lock<mutex> pause_wait_lock(decode_pause_mutex_);
1195                         decode_pause_cond_.wait(pause_wait_lock);
1196                 }
1197         }
1198 }
1199
1200 void DecodeSignal::decode_proc()
1201 {
1202         current_segment_id_ = 0;
1203
1204         // If there is no input data available yet, wait until it is or we're interrupted
1205         if (logic_mux_data_->logic_segments().size() == 0) {
1206                 unique_lock<mutex> input_wait_lock(input_mutex_);
1207                 decode_input_cond_.wait(input_wait_lock);
1208         }
1209
1210         if (decode_interrupt_)
1211                 return;
1212
1213         shared_ptr<LogicSegment> input_segment = logic_mux_data_->logic_segments().front();
1214         assert(input_segment);
1215
1216         // Create the initial segment and set its sample rate so that we can pass it to SRD
1217         create_decode_segment();
1218         segments_.at(current_segment_id_).samplerate = input_segment->samplerate();
1219         segments_.at(current_segment_id_).start_time = input_segment->start_time();
1220
1221         start_srd_session();
1222
1223         uint64_t sample_count = 0;
1224         uint64_t abs_start_samplenum = 0;
1225         do {
1226                 // Keep processing new samples until we exhaust the input data
1227                 do {
1228                         lock_guard<mutex> input_lock(input_mutex_);
1229                         sample_count = input_segment->get_sample_count() - abs_start_samplenum;
1230
1231                         if (sample_count > 0) {
1232                                 decode_data(abs_start_samplenum, sample_count, input_segment);
1233                                 abs_start_samplenum += sample_count;
1234                         }
1235                 } while (error_message_.isEmpty() && (sample_count > 0) && !decode_interrupt_);
1236
1237                 if (error_message_.isEmpty() && !decode_interrupt_ && sample_count == 0) {
1238                         if (current_segment_id_ < logic_mux_data_->logic_segments().size() - 1) {
1239                                 // Process next segment
1240                                 current_segment_id_++;
1241
1242                                 try {
1243                                         input_segment = logic_mux_data_->logic_segments().at(current_segment_id_);
1244                                 } catch (out_of_range&) {
1245                                         qDebug() << "Decode error for" << name() << ": no logic mux segment" \
1246                                                 << current_segment_id_ << "in decode_proc(), mux segments size is" \
1247                                                 << logic_mux_data_->logic_segments().size();
1248                                         return;
1249                                 }
1250                                 abs_start_samplenum = 0;
1251
1252                                 // Create the next segment and set its metadata
1253                                 create_decode_segment();
1254                                 segments_.at(current_segment_id_).samplerate = input_segment->samplerate();
1255                                 segments_.at(current_segment_id_).start_time = input_segment->start_time();
1256
1257                                 // Reset decoder state but keep the decoder stack intact
1258                                 terminate_srd_session();
1259                         } else {
1260                                 // All segments have been processed
1261                                 decode_finished();
1262
1263                                 // Wait for new input data or an interrupt was requested
1264                                 unique_lock<mutex> input_wait_lock(input_mutex_);
1265                                 decode_input_cond_.wait(input_wait_lock);
1266                         }
1267                 }
1268         } while (error_message_.isEmpty() && !decode_interrupt_);
1269
1270         // Potentially reap decoders when the application no longer is
1271         // interested in their (pending) results.
1272         if (decode_interrupt_)
1273                 terminate_srd_session();
1274 }
1275
1276 void DecodeSignal::start_srd_session()
1277 {
1278         // If there were stack changes, the session has been destroyed by now, so if
1279         // it hasn't been destroyed, we can just reset and re-use it
1280         if (srd_session_) {
1281                 // When a decoder stack was created before, re-use it
1282                 // for the next stream of input data, after terminating
1283                 // potentially still executing operations, and resetting
1284                 // internal state. Skip the rather expensive (teardown
1285                 // and) construction of another decoder stack.
1286
1287                 // TODO Reduce redundancy, use a common code path for
1288                 // the meta/start sequence?
1289                 terminate_srd_session();
1290
1291                 // Metadata is cleared also, so re-set it
1292                 uint64_t samplerate = 0;
1293                 if (segments_.size() > 0)
1294                         samplerate = segments_.at(current_segment_id_).samplerate;
1295                 if (samplerate)
1296                         srd_session_metadata_set(srd_session_, SRD_CONF_SAMPLERATE,
1297                                 g_variant_new_uint64(samplerate));
1298                 for (const shared_ptr<Decoder>& dec : stack_)
1299                         dec->apply_all_options();
1300                 srd_session_start(srd_session_);
1301
1302                 return;
1303         }
1304
1305         // Create the session
1306         srd_session_new(&srd_session_);
1307         assert(srd_session_);
1308
1309         // Create the decoders
1310         srd_decoder_inst *prev_di = nullptr;
1311         for (const shared_ptr<Decoder>& dec : stack_) {
1312                 srd_decoder_inst *const di = dec->create_decoder_inst(srd_session_);
1313
1314                 if (!di) {
1315                         set_error_message(tr("Failed to create decoder instance"));
1316                         srd_session_destroy(srd_session_);
1317                         srd_session_ = nullptr;
1318                         return;
1319                 }
1320
1321                 if (prev_di)
1322                         srd_inst_stack(srd_session_, prev_di, di);
1323
1324                 prev_di = di;
1325         }
1326
1327         // Start the session
1328         if (segments_.size() > 0)
1329                 srd_session_metadata_set(srd_session_, SRD_CONF_SAMPLERATE,
1330                         g_variant_new_uint64(segments_.at(current_segment_id_).samplerate));
1331
1332         srd_pd_output_callback_add(srd_session_, SRD_OUTPUT_ANN,
1333                 DecodeSignal::annotation_callback, this);
1334
1335         srd_pd_output_callback_add(srd_session_, SRD_OUTPUT_BINARY,
1336                 DecodeSignal::binary_callback, this);
1337
1338         srd_session_start(srd_session_);
1339
1340         // We just recreated the srd session, so all stack changes are applied now
1341         stack_config_changed_ = false;
1342 }
1343
1344 void DecodeSignal::terminate_srd_session()
1345 {
1346         // Call the "terminate and reset" routine for the decoder stack
1347         // (if available). This does not harm those stacks which already
1348         // have completed their operation, and reduces response time for
1349         // those stacks which still are processing data while the
1350         // application no longer wants them to.
1351         if (srd_session_) {
1352                 srd_session_terminate_reset(srd_session_);
1353
1354                 // Metadata is cleared also, so re-set it
1355                 uint64_t samplerate = 0;
1356                 if (segments_.size() > 0)
1357                         samplerate = segments_.at(current_segment_id_).samplerate;
1358                 if (samplerate)
1359                         srd_session_metadata_set(srd_session_, SRD_CONF_SAMPLERATE,
1360                                 g_variant_new_uint64(samplerate));
1361                 for (const shared_ptr<Decoder>& dec : stack_)
1362                         dec->apply_all_options();
1363         }
1364 }
1365
1366 void DecodeSignal::stop_srd_session()
1367 {
1368         if (srd_session_) {
1369                 // Destroy the session
1370                 srd_session_destroy(srd_session_);
1371                 srd_session_ = nullptr;
1372
1373                 // Mark the decoder instances as non-existant since they were deleted
1374                 for (const shared_ptr<Decoder>& dec : stack_)
1375                         dec->invalidate_decoder_inst();
1376         }
1377 }
1378
1379 void DecodeSignal::connect_input_notifiers()
1380 {
1381         // Disconnect the notification slot from the previous set of signals
1382         disconnect(this, SLOT(on_data_cleared()));
1383         disconnect(this, SLOT(on_data_received()));
1384
1385         // Connect the currently used signals to our slot
1386         for (decode::DecodeChannel& ch : channels_) {
1387                 if (!ch.assigned_signal)
1388                         continue;
1389
1390                 const data::SignalBase *signal = ch.assigned_signal;
1391                 connect(signal, SIGNAL(samples_cleared()),
1392                         this, SLOT(on_data_cleared()));
1393                 connect(signal, SIGNAL(samples_added(uint64_t, uint64_t, uint64_t)),
1394                         this, SLOT(on_data_received()));
1395         }
1396 }
1397
1398 void DecodeSignal::create_decode_segment()
1399 {
1400         // Create annotation segment
1401         segments_.emplace_back();
1402
1403         // Add annotation classes
1404         for (const shared_ptr<Decoder>& dec : stack_)
1405                 for (Row* row : dec->get_rows())
1406                         segments_.back().annotation_rows.emplace(row, RowData(row));
1407
1408         // Prepare our binary output classes
1409         for (const shared_ptr<Decoder>& dec : stack_) {
1410                 uint32_t n = dec->get_binary_class_count();
1411
1412                 for (uint32_t i = 0; i < n; i++)
1413                         segments_.back().binary_classes.push_back(
1414                                 {dec.get(), dec->get_binary_class(i), deque<DecodeBinaryDataChunk>()});
1415         }
1416 }
1417
1418 void DecodeSignal::annotation_callback(srd_proto_data *pdata, void *decode_signal)
1419 {
1420         assert(pdata);
1421         assert(decode_signal);
1422
1423         DecodeSignal *const ds = (DecodeSignal*)decode_signal;
1424         assert(ds);
1425
1426         if (ds->decode_interrupt_)
1427                 return;
1428
1429         if (ds->segments_.empty())
1430                 return;
1431
1432         lock_guard<mutex> lock(ds->output_mutex_);
1433
1434         // Get the decoder and the annotation data
1435         assert(pdata->pdo);
1436         assert(pdata->pdo->di);
1437         const srd_decoder *const srd_dec = pdata->pdo->di->decoder;
1438         assert(srd_dec);
1439
1440         const srd_proto_data_annotation *const pda = (const srd_proto_data_annotation*)pdata->data;
1441         assert(pda);
1442
1443         // Find the row
1444         Decoder* dec = ds->get_decoder_by_instance(srd_dec);
1445         assert(dec);
1446
1447         AnnotationClass* ann_class = dec->get_ann_class_by_id(pda->ann_class);
1448         if (!ann_class) {
1449                 qWarning() << "Decoder" << ds->display_name() << "wanted to add annotation" <<
1450                         "with class ID" << pda->ann_class << "but there are only" <<
1451                         dec->ann_classes().size() << "known classes";
1452                 return;
1453         }
1454
1455         const Row* row = ann_class->row;
1456
1457         if (!row)
1458                 row = dec->get_row_by_id(0);
1459
1460         RowData& row_data = ds->segments_[ds->current_segment_id_].annotation_rows.at(row);
1461
1462         // Add the annotation to the row
1463         const Annotation* ann = row_data.emplace_annotation(pdata);
1464
1465         // We insert the annotation into the global annotation list in a way so that
1466         // the annotation list is sorted by start sample and length. Otherwise, we'd
1467         // have to sort the model, which is expensive
1468         deque<const Annotation*>& all_annotations =
1469                 ds->segments_[ds->current_segment_id_].all_annotations;
1470
1471         if (all_annotations.empty()) {
1472                 all_annotations.emplace_back(ann);
1473         } else {
1474                 const uint64_t new_ann_len = (pdata->end_sample - pdata->start_sample);
1475                 bool ann_has_earlier_start = (pdata->start_sample < all_annotations.back()->start_sample());
1476                 bool ann_is_longer = (new_ann_len >
1477                         (all_annotations.back()->end_sample() - all_annotations.back()->start_sample()));
1478
1479                 if (ann_has_earlier_start && ann_is_longer) {
1480                         bool ann_has_same_start;
1481                         auto it = all_annotations.end();
1482
1483                         do {
1484                                 it--;
1485                                 ann_has_earlier_start = (pdata->start_sample < (*it)->start_sample());
1486                                 ann_has_same_start = (pdata->start_sample == (*it)->start_sample());
1487                                 ann_is_longer = (new_ann_len > (*it)->length());
1488                         } while ((ann_has_earlier_start || (ann_has_same_start && ann_is_longer)) && (it != all_annotations.begin()));
1489
1490                         // Allow inserting at the front
1491                         if (it != all_annotations.begin())
1492                                 it++;
1493
1494                         all_annotations.emplace(it, ann);
1495                 } else
1496                         all_annotations.emplace_back(ann);
1497         }
1498
1499         // When emplace_annotation() inserts instead of appends an annotation,
1500         // the pointers in all_annotations that follow the inserted annotation and
1501         // point to annotations for this row are off by one and must be updated
1502         if (&(row_data.annotations().back()) != ann) {
1503                 // Search backwards until we find the annotation we just added
1504                 auto row_it = row_data.annotations().end();
1505                 auto all_it = all_annotations.end();
1506                 do {
1507                         all_it--;
1508                         if ((*all_it)->row_data() == &row_data)
1509                                 row_it--;
1510                 } while (&(*row_it) != ann);
1511
1512                 // Update the annotation addresses for this row's annotations until the end
1513                 do {
1514                         if ((*all_it)->row_data() == &row_data) {
1515                                 *all_it = &(*row_it);
1516                                 row_it++;
1517                         }
1518                         all_it++;
1519                 } while (all_it != all_annotations.end());
1520         }
1521 }
1522
1523 void DecodeSignal::binary_callback(srd_proto_data *pdata, void *decode_signal)
1524 {
1525         assert(pdata);
1526         assert(decode_signal);
1527
1528         DecodeSignal *const ds = (DecodeSignal*)decode_signal;
1529         assert(ds);
1530
1531         if (ds->decode_interrupt_)
1532                 return;
1533
1534         // Get the decoder and the binary data
1535         assert(pdata->pdo);
1536         assert(pdata->pdo->di);
1537         const srd_decoder *const srd_dec = pdata->pdo->di->decoder;
1538         assert(srd_dec);
1539
1540         const srd_proto_data_binary *const pdb = (const srd_proto_data_binary*)pdata->data;
1541         assert(pdb);
1542
1543         // Find the matching DecodeBinaryClass
1544         DecodeSegment* segment = &(ds->segments_.at(ds->current_segment_id_));
1545
1546         DecodeBinaryClass* bin_class = nullptr;
1547         for (DecodeBinaryClass& bc : segment->binary_classes)
1548                 if ((bc.decoder->get_srd_decoder() == srd_dec) &&
1549                         (bc.info->bin_class_id == (uint32_t)pdb->bin_class))
1550                         bin_class = &bc;
1551
1552         if (!bin_class) {
1553                 qWarning() << "Could not find valid DecodeBinaryClass in segment" <<
1554                                 ds->current_segment_id_ << "for binary class ID" << pdb->bin_class <<
1555                                 ", segment only knows" << segment->binary_classes.size() << "classes";
1556                 return;
1557         }
1558
1559         // Add the data chunk
1560         bin_class->chunks.emplace_back();
1561         DecodeBinaryDataChunk* chunk = &(bin_class->chunks.back());
1562
1563         chunk->sample = pdata->start_sample;
1564         chunk->data.resize(pdb->size);
1565         memcpy(chunk->data.data(), pdb->data, pdb->size);
1566
1567         Decoder* dec = ds->get_decoder_by_instance(srd_dec);
1568
1569         ds->new_binary_data(ds->current_segment_id_, (void*)dec, pdb->bin_class);
1570 }
1571
1572 void DecodeSignal::on_capture_state_changed(int state)
1573 {
1574         // If a new acquisition was started, we need to start decoding from scratch
1575         if (state == Session::Running) {
1576                 logic_mux_data_invalid_ = true;
1577                 begin_decode();
1578         }
1579 }
1580
1581 void DecodeSignal::on_data_cleared()
1582 {
1583         reset_decode();
1584 }
1585
1586 void DecodeSignal::on_data_received()
1587 {
1588         // If we detected a lack of input data when trying to start decoding,
1589         // we have set an error message. Only try again if we now have data
1590         // to work with
1591         if ((!error_message_.isEmpty()) && (get_input_segment_count() == 0))
1592                 return;
1593
1594         if (!logic_mux_thread_.joinable())
1595                 begin_decode();
1596         else
1597                 logic_mux_cond_.notify_one();
1598 }
1599
1600 void DecodeSignal::on_annotation_visibility_changed()
1601 {
1602         annotation_visibility_changed();
1603 }
1604
1605 } // namespace data
1606 } // namespace pv